Floodplain wetlands are complex fluvial systems that provide critical ecosystem services. Some floodplain wetlands suffer from erosion that threatens to create and enlarge channels and potentially disconnect wetlands from vital overbank flows. Excessive channel erosion can have dramatic effects on flow routing, inundation patterns and aquatic ecosystem dynamics. Channel erosion is sometimes mitigated by the use of bed control structures to arrest bed lowering and associated channel enlargement. Stream power modelling techniques based on Digital Elevation Models (DEMs) have rarely been used in low-gradient rivers and wetlands. A modified stream power modelling method was used to identify hotspots of enhanced stream power, and therefore potential erosion risk, in the Ramsar-listed Macquarie Marshes, NSW. Peaks in stream power occur where pronounced steps exist in channel longitudinal profiles, most notably at rock bed control structures. In low-gradient floodplain wetlands, local over-steepening within the channel is associated with increased stream power and erosion potential. Stream power modelling provides an important screening tool to prioritise sites for detailed investigation and erosion assessment. Ultimately, such modelling can guide further monitoring and/or interventions to reduce the risk of erosion and ecological deteriorations.